Electronic Dissertations Library

Identification of ß-sheet motifs in three-dimensional protein structures, using a subgraph isomorphism algorithm: an update of a 1992 study, by Ruth V. Spriggs

Reference List of Internet Pages

http://www2.ebi.ac.uk/pdb/

EBI (European Bioinformatics Institute) PDB page

http://www.rcsb.org/pdb/

Research Collaboratory for Structural Bioinformatics (RCSB) PDB home page

http://swift.embl-heidelberg.de/pdbsel/

The PDB_SELECT home page

http://bmbsgi11.leeds.ac.uk/bmb5dp/gor.html

A website implementing the GOR method of protein structure prediction. The researcher can input an amino acid sequence and the secondary structure elements of the protein will be predicted.

http://protein.toulouse.inra.fr/prodom.html

Recommended by Segovia (1997) for protein sequence homologue searches

http://www.sdsc.edu/MEME/meme/website/

Recommended by Segovia (1997) for protein sequence homologue searches

http://www.blocks.fhcrc.org/

Recommended by Segovia (1997) for protein sequence homologue searches

http://dodo.cpmc.columbia.edu/pp/submit_adv.html

Recommended by Segovia (1997) for protein secondary structure prediction

http://www.ibcp.fr/serv_pred.html

Recommended by Segovia (1997) for protein secondary structure prediction

http://www.doe-mbi.ucla.edu/people/frsvr/frsvr.html

Recommended by Segovia (1997) for fold recognition and tertiary structure prediction

http://dodo.cpmc.columbia.edu/pp/submit_adv.html

Recommended by Segovia (1997) for fold recognition and tertiary structure prediction

http://www-lmmb.ncifcrf.gov/~nicka/123D.html

Recommended by Segovia (1997) for fold recognition and tertiary structure prediction

http://www.cmpharm.ucsf.edu/~jmc/pred2ary/

User access to the Chandonia and Karplus (1999) system for protein structure prediction

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